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| Walter A., Gandon S. & Lion S. (2024) Effect of unequal vaccination coverage and migration on long-term pathogen evolution in a metapopulation. Journal of evolutionary Biology. 37(2): 189-200.
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| Benhamou W., Blanquart F., Choisy M., Berngruber T. W., Choquet R. & Gandon S. (2024) Evolution of Virulence in Emerging Epidemics: From Theory to Experimental Evolution and Back. Virus Evolution. veae069.
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| Letty J., Besnard A., Chatelain N., Choquet R., Holé G., Léonard Y., Vannesson R. & Marchandeau S. (2024) RHDV2 outbreak reduces survival and juvenile recruitment, causing European rabbit population collapse. Ecosphere. 15: e70003.
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| Benhamou W., Lion S., Choquet R. & Gandon S. (2023) Phenotypic evolution of SARS-CoV-2: a statistical inference approach. Evolution. 77(10): 2213-2223.
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| Lion S., Sasaki A. & Boots M. (2023) Extending eco-evolutionary theory with oligomorphic dynamics. Ecology Letters.
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| Ollivier V., Choquet R., Gamble A., Bastien M., Combes B., Gilot-Fromont E., Pellerinn M., Gaillard J-M., Lemaître J-F., Verheyden H. & Boulinier T. (2023) Temporal dynamics of antibody level against Lyme disease bacteria in roe deer: Tale of a sentinel? Ecology and Evolution. 13: e10414.
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| Duriez O., Sassi Y., Le Gall-Ladevèze C., Giraud L., Straughan R., Dauverné L., Terras A., Boulinier T., Choquet R., Van De Wiele A., Hirschinger J., Guérin J. L. & Le Loc'h G. (2023) Highly pathogenic avian influenza affects vultures’ movements and breeding output. Current Biology. 33: 3766-3774.e3.
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| Souc C., Sadoul N., Blanchon T., Vittecoq M., Pin C., Vidal E., Mante A., Choquet R. & McCoy K. D. (2023) Natal colony influences age-specific movement patterns of the Yellow-legged gull (Larus michahellis). Movement Ecology. 11: 11.
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| Fabre F., Burie J-B., Ducrot A., Lion S., Richard Q. & Djidjou-Demasse R. (2022) An epi-evolutionary model for predicting the adaptation of spore-producing pathogens to quantitative resistance in heterogeneous environments. Evolutionary applications. 15(1): 95-110.
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| Gandon S. & Lion S. (2022) Targeted vaccination and the speed of SARS-CoV-2 adaptation. PNAS. 119(3): e2110666119.
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| Lion S., Boots M. & Sasaki A. (2022) Multi-morph eco-evolutionary dynamics in structured populations. American naturalist. 200(3): 345-372.
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| Lion S. & Gandon S. (2022) Evolution of class-structured populations in fluctuating environments. Evolution.
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| Sasaki A., Lion S. & Boots M. (2022) Antigenic escape selects for the evolution of higher pathogen transmission and virulence. Nature Ecology and Evolution. 6: 51-62.
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| Pacheco H., Lopes A. M., Bárcena J., Blanco E., Abrantes J., Esteves P., Choquet R., Célio Alves P. & Santos N. (2022) Multi-event capture–recapture models estimate the diagnostic performance of serological tests for myxoma and rabbit haemorrhagic disease viruses in the absence of reference samples. Transboundary and Emerging Diseases. 69: e3024-e3035.
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| Caizergues A. E., Grégoire A., Choquet R., Perret S. & Charmantier A. (2022) Are behaviour and stress-related phenotypes in urban birds adaptive? Journal of Animal Ecology. 91: 1627-1641.
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| Bruce J. B., Lion S., Buckling A., Westra E. & Gandon S. (2021) Regulation of prophage induction and lysogenization by phage communication systems. Current Biology. 31: 1-6.
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| Descamps S., Merkel B., Strøm H., Choquet R., Steen H., Fort J., Gavrilo M., Grémillet D., Jakubas D., Jerstad K., Karnovsky N. J., Krasnov Y. V., Moe B., Welcker J. & Wojczulanis-Jakubas K. (2021) Sharing wintering grounds does not synchronize annual survival in a high Arctic seabird, the little auk. Marine Ecology Progress Series. 676: 233-242. (10.3354/meps13400)
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| Walter A. & Lion S. (2021) Epidemiological and evolutionary consequences of periodicity in treatment coverage. Proceedings of the Royal Society B. 288: 20203007.
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| Tavecchia G., Gimenez O., Choquet R., Rotger A., Oro D., Tenan S. & Sanz-Aguilar A. (2021) The trap of hidden processes: Why ‘quick & dirty’ methods to estimate mortality are not always good. A comment to De Pascalis et al. (2020). Biological Conservation. 256: 109057.
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| Rousseau J., Nakamura M., Rio-Maior H., Álvares F., Choquet R., Madeira de Carvalho L., Godinho R. & Santos N. (2021) Non-invasive molecular survey of sarcoptic mange in wildlife: Diagnostic performance in wolf faecal samples evaluated by multi-event capture–recapture models. Pathogens. 10: 1-15.
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| Carmona P. & Gandon S. (2020) Winter is coming: pathogen emergence in seasonal environments. PLoS Computational Biology. 16(7): e1007954.
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| Chevallereau A., Rollie C., Watson B., Chyou T-yuan., Fradet O., McLeod I., Fineran P., Brown C., Gandon S. & Westra E. R. (2020) Targeting of temperate phages drives loss of type I crispr-cas systems. Nature. 578: 149-153.
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| Chevallereau A., Meaden S., Fradet O., Landsberger M., Maestri A., Biswas A., Gandon S., van Houte S. & Westra E. R. (2020) Exploitation of the cooperative behaviors of anti-crispr phages. Cell Host and Microbe. 27(2): 157-159.
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| Day T., Parsons T., Lambert A. & Gandon S. (2020) The Price equation and evolutionary epidemiology. Philosophical Transactions B. 375(1797): 20190357.
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| Day T., Gandon S., Lion S. & Otto S. (2020) On the evolutionary epidemiology of SARS-CoV-2. Current Biology. 30(15): R849-R857.
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| Mirrahimi S. & Gandon S. (2020) Evolution of specialization in heterogeneous environments: equilibrium between selection, mutation and migration. Genetics. 214: 479-491.
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| Descamps S., Merkel B., Strøm H., Choquet R., Steen H., Fort J., Gavrilo M., Grémillet D., Jakubas D., Jerstad K., Karnovsky N. J., Krasnov Y. V., Moe B., Welcker J. & Wojczulanis-Jakubas K. (2020) Sharing wintering grounds does not synchronize annual survival in a high Arctic seabird, the little auk. Marine Ecology Progress Series. SEA:
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| Genovart M., Gimenez O., Bertolero A., Choquet R., Oro D. & Pradel R. (2020) Decrease in social cohesion in a colonial seabird under a perturbation regime. Scientific Reports.Nature Research 10:
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| Rataud A., Dupraz M., Toty C., Blanchon T., Vittecoq M., Choquet R. & McCoy K. D. (2020) Evaluating Functional Dispersal in a Nest Ectoparasite and Its Eco-Epidemiological Implications. Frontiers in Veterinary Science. 7:
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| Chabas H., Nicot A., Meaden S., Westra E., Tremblay D., Pradier L., Lion S., Moineau S. & Gandon S. (2019) Variability in the durability of CRISPR-Cas immunity. Philosophical Transactions B. 374: 20180097.
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| Cornet S'ephane., Nicot A., Rivero A. & Gandon S. (2019) Avian malaria alters the dynamics of blood feeding in culex pipiens mosquitoes. Malaria journal. 18(1): 82.
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| Gandon S. (2019) Evolutionary epidemiology theory of vaccination. In: Pertussis: Epidemiology, Immunology, and Evolution. (Rohani P., Scarpino S. V., eds.) Oxford University Press, p. 133-143.
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| Gandon S., Heitzmann L. & Sebbane F. (2019) To block or not to block: the adaptive manipulation of plague transmission. Evolution letters. 3(2): 152-161.
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| Govaert L., Fronhofer E. A., Lion S., Eizaguirre C., Bonte D., Egas M., Hendry A., De Brito Martins A., Melian C., Raeymaekers J., Ratikainen I., Saether B-E., Schweitzer J. & Matthews B. (2019) Eco-evolutionary feedbacks – theoretical models and perspectives. Functional Ecology. 33(1): 13-30.
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| Levin S., Gandon S. & West S. (2019) The social coevolution hypothesis for the origin of enzymatic cooperation. Nature Ecology and Evolution.
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| Westra E. R., Van Houte S., Gandon S. & Whitaker R. (2019) The ecology and evolution of microbial crispr-cas adaptive immune systems. Philosophical Transactions B.
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| Ansaldi M., Debarbieux L., Gandon S., Petit M-A., Tavares P. & Boulanger P. (2018) "French phage network" – third meeting report. Viruses. 10(3): 123.
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| Böhme U., Otto T. D., Cotton J. A., Steinbiss S., Sanders M., Oyola S. O., Nicot A., Gandon S., Patra K. P., Herd C., Bushell E., Modrzynska K. K., Billker O., Vinetz J. M., Rivero A., Newbold C. I. & Berriman M. (2018) Complete avian malaria parasite genomes reveal features associated with lineage-specific evolution in birds and mammals. Genome Research. 28(4): 547-560.
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| Chabas H., Lion S., Nicot A., Meaden S., van Houte S., Moineau S., Wahl L. M., Westra E. R. & Gandon S. (2018) Evolutionary emergence of infectious diseases in heterogeneous host populations. PLoS Biology. 16(9): e2006738.
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| Gandon S. (2018) Evolution and manipulation of vector host choice. The American Naturalist.
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| Landsberger M., Gandon S., Meaden S., Rollie C., Chevallereau A., Chabas H., Buckling A., Westra E. R. & van Houte S. (2018) Anti-crispr phages cooperate to overcome crispr-cas immunity. Cell. 174(4): 908-916.
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| Lion S. (2018) Theoretical approaches in evolutionary ecology: environmental feedback as a unifying perspective. The American Naturalist. 191(1): 21-44.
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| Lion S. (2018) Class structure, demography and selection: reproductive-value weighting in nonequilibrium, polymorphic populations. The American Naturalist. 191(5): 620-637.
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| Lion S. (2018) From the Price equation to the selection gradient in class-structured populations: a quasi-equilibrium route. Journal of Theoretical Biology. 447C: 178-189.
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| Lion S. & Metz J. A. J. (2018) Beyond R0 maximisation: on pathogen evolution and environmental dimensions. Trends in Ecology and Evolution. 33: 75-90.
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| Parsons T. L., Lambert A., Day T. & Gandon S. (2018) Pathogen evolution in finite populations: slow and steady spreads the best. Journal of The Royal Society Interface. 15(147): 135.
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| Pigeault R., Caudron Q., Nicot A., Rivero A. & Gandon S. (2018) Timing malaria transmission with mosquito fluctuations. Evolution Letters. 378-389.
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| Rivero A. & Gandon S. (2018) Evolutionary ecology of avian malaria: past to present. Trends in Parasitology. 34: 712-726.
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| Bourret V., Lyall J., Frost S. D. W., Teillaud A., Smith C. A., Leclaire S., Fu J., Gandon S., Guérin J-L. & Tiley L. S. (2017) Adaptation of avian influenza virus to a swine host. Virus evolution. 3(1): vex007.
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| Gandon S. & Lion S. (2017) Ebola evolution during the 2013-2016 outbreak. Peer Community in Evolutionary Biology. 100019.
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| Gandon S. & Mirrahimi S. (2017) A Hamilton–Jacobi method to describe the evolutionary equilibria in heterogeneous environments and with non-vanishing effects of mutations. Comptes Rendus Mathematique. 355(2): 155-160.
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| Torres-Barceló C., Kaltz O., Froissart R., Gandon S., Ginet N. & Ansaldi M. (2017) "French phage network" – second meeting report. Viruses. 9(4): 87.
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| Gandon S. (2016) Why be temperate: lessons from bacteriophage lambda. Trends in Microbiology. 24(5): 356-365.
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| Gandon S., Day T., Metcalf C. J. E. & Grenfell B. (2016) Forecasting epidemiological and evolutionary dynamics of infectious diseases. Trends in Ecology and Evolution. 31: 776-788.
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| Lion S. (2016) Moment equations in spatial evolutionary ecology. Journal of theoretical biology. 405: 46-57.
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| Lion S. & Gandon S. (2016) Spatial evolutionary epidemiology of spreading epidemics. Proceedings of the Royal Society B. 283: 20161170.
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| Pigeault R., Garnier R., Rivero A. & Gandon S. (2016) Evolution of transgenerational immunity in invertebrates. Proceedings of the Royal Society London B.
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| van Houte S., Ekroth A. K. E., Broniewski J. M., Chabas H., Ashby B., Bondy-Denomy J., Gandon S., Boots M., Paterson S., Buckling A. & Westra E. R. (2016) The diversity-generating benefits of a prokaryotic adaptive immune system. Nature. 532(7599): 385-388.
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| Abbate J. L., Kada S. & Lion S. (2015) Beyond mortality: Sterility as a neglected component of parasite virulence. PLoS Pathogens. 11(12): e1005229.
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| Berngruber T. W., Lion S. & Gandon S. (2015) Spatial structure, transmission modes and the evolution of viral exploitation strategies. PLos Pathogens. 11(4): e1004810.
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| Griette Q., Raoul G. & Gandon S. (2015) Virulence evolution at the front line of spreading epidemics. Evolution. 69(11): 2810-2819.
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| Kada S. & Lion S. (2015) Superinfection and the coevolution of parasite virulence and host recovery. Journal of evolutionary Biology. 28(12): 2285-2299.
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| Lion S. & Gandon S. (2015) Evolution of spatially structured host-parasite interactions. Journal of evolutionary biology. 28(1): 10-28.
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| Park A. W., Haven J., Kaplan R. & Gandon S. (2015) Refugia and the evolutionary epidemiology of drug resistance. Biology letters. 11(11):
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| Pigeault R., Vézilier J., Nicot A., Gandon S. & Rivero A. (2015) Transgenerational effect of infection in plasmodium-infected mosquitoes. Biology Letters. 11: 20141025.
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| Pigeault R., Vézilier J., Cornet S., Zélé F., Nicot A., Perret P., Gandon S. & Rivero A. (2015) Avian malaria: a new lease of life for an old experimental model to study the evolutionary ecology of Plasmodium. Philosophical Transactions of the Royal Society B: Biological Sciences. 370(1675): 20140330.
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| Pigeault R., Nicot R., Gandon S. & Rivero A. (2015) Mosquito age and avian malaria infection. Malaria journal. 14: 383.
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| Vale P. F., Lafforgue G., Gatchitch F., Gardan R., Moineau S. & Gandon S. (2015) Costs of CRISPR-Cas mediated resistance in Streptococcus thermophilus. Proceedings of the Royal Society of London B. 282(1812): 20151270.
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| Vézilier J., Nicot A., Gandon S. & Rivero A. (2015) Plasmodium infection brings forward mosquito oviposition. Biology Letters. 11(3): 20140840.
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| Zurita-Gutiérrez Y. H. & Lion S. (2015) Spatial structure, host heterogeneity and parasite virulence: implications for vaccine-driven evolution. Ecology Letters. 18(8): 779-789.
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| Alfaro M., Coville J. & Raoul G. (2014) Bistable travelling waves for nonlocal reaction diffusion equations. Discret. Contin. Dyn. Syst.. 34(5): 1775-1791.
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| Alizon S., Lion S., Murall C. L. & Abbate J. L. (2014) Quantifying the epidemic spread of Ebola virus (EBOV) in Sierra Leone using phylodynamics. Virulence. 5: 825-827.
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| Blanquart F. (2014) The demography of a metapopulation in an environment changing in time and space. Theoretical Population Biology. 94: 1-9.
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| Blanquart F. & Gandon S. (2014) On the evolution of migration in heterogeneous environments. Evolution. 68: 1617-1628.
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| Cornet S., Nicot A., Rivero A. & Gandon S. (2014) Evolution of plastic transmission strategies in avian malaria. PLoS Pathogens. 10(9): e1004308.
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| Degond P., Frouvelle A. & Raoul G. (2014) Local stability of perfect alignment for a spatially homogeneous kinetic model. J. Stat. Phys.. 157(1): 84-112.
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| Gandon S. & Vale P. F. (2014) The evolution of resistance against good and bad infections. Journal of evolutionary biology. 27: 303-3012.
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| Garnier R., Gandon S., Harding K. C. & Boulinier T. (2014) Length of intervals between epidemics: evaluating the influence of maternal transfer of immunity. Ecology and Evolution.
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| Zélé F., Vézilier J., L'Ambert G., Nicot A., Gandon S., Rivero A. & Duron O. (2014) Dynamics of prevalence and diversity of avian malaria infections in wild Culex pipiens mosquitoes: the effects of Wolbachia, filarial nematodes and insecticide resistance. Parasites and Vectors. 7(437):
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| Alfaro M., Coville J. & Raoul G. (2013) Travelling waves in a nonlocal reaction-diffusion equation as a model for a population structured by a space variable and a phenotypic trait. Comm. Partial Differential Equations. 38(12): 2126-2154.
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| Balagué D., Carrillo J. A., Laurent T. & Raoul G. (2013) Nonlocal interactions by repulsive-attractive potentials: radial ins/stability. Physica D: Nonlinear Phenomena. 260: 5-25.
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| Balagué D., Carrillo J. A., Laurent T. & Raoul G. (2013) Dimensionality of local minimizers of the interaction energy. Arch. Ration. Mech. Anal.. 209(3): 1055-1088.
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| Berngruber T. W., Lion S. & Gandon S. (2013) Evolution of suicide as a defense strategy against pathogens in a spatially structured environment. Ecology Letters. 16: 446-453. 
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| Berngruber T. W., Froissart R., Choisy M. & Gandon S. (2013) Evolution of virulence in emerging epidemics. PLoS Pathogens. 9: e1003209.
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| Blanquart F., Kaltz O., Nuismer S. L. & Gandon S. (2013) A practical guide to measuring local adaptation. Ecology Letters. 16: 1195-1205.
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| Calsina A., Cuadrado S., Desvillettes L. & Raoul G. (2013) Asymptotics of steady states of a selection mutation equation for small mutation rate. Proc. Roy. Soc. Edinburgh Sect. A. 143(6): 1123-1146.
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| Cornet S., Rivero A. & Gandon S. (2013) Malaria infection increases bird attractiveness to uninfected mosquitoes. Ecology Letters. 16(3): 323-329.
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| Cornet S., Nicot A., Rivero A. & Gandon S. (2013) Both infected and uninfected mosquitoes are attracted toward malaria infected birds. Malaria journal. 12(179):
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| Cornet S., Gandon S. & Rivero A. (2013) Patterns of phenoloxidase activity in insecticide resistant and susceptible mosquitoes differ between laboratory-selected and wild-caught individuals. Parasites and Vectors. 6(315):
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| Débarre F., Ronce O. & Gandon S. (2013) Quantifying the effects of migration and mutation on adaptation and demography in spatially heterogeneous environments. Journal of evolutionary biology. 26: 1185-1202.
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| Garnier R., Boulinier T. & Gandon S. (2013) Evolution of the temporal persistence of immune protection. Biology Letters. 9:
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| Garnier R., Gandon S., Chaval Y., Charbonnel N. & Boulinier T. (2013) Evidence of cross-transfer of maternal antibodies through allosuckling in a mammal: potential importance for behavioral ecology. Mammalian Biology. 78: 361-364.
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| Lélu M., Langlais M., Poulle M-L., Gilot-Fromont E. & Gandon S. (2013) When should a trophically and vertically transmitted parasite manipulate its intermediate host? The case of Toxoplasma gondii. Proceedings of the Royal Society B.
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| Lion S. (2013) Multiple infections, kin selection and the evolutionary epidemiology of parasite traits. Journal of evolutionary biology. 26(10): 2107-2122.
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| Mirrahimi S. & Raoul G. (2013) Dynamics of sexual populations structured by a space variable and a phenotypical trait. Theoretical Population Biology. 84: 87-103.
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| Vitalis R., Rousset F., Kobayashi Y., Olivieri I. & Gandon S. (2013) The joint evolution of dispersal and dormancy in a metapopulation with local extinctions and kin competition. Evolution. 67: 1676-1691.
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| Blanquart F., Gandon S. & Nuismer S. (2012) The effects of migration and drift on local adaptation to a heterogeneous environment. Journal of evolutionary biology. 15: 1351–1363.
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| Blanquart F. & Gandon S. (2012) Time-shift experiments and patterns of adaptation across time and space. Ecology Letters.
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| Bouin E., Calvez V., Meunier N., Mirrahimi S., Perthame B., Raoul G. & Voituriez R. (2012) Invasion fronts with variable motility: phenotype selection, spatial sorting and wave acceleration. Comptes Rendus Mathématiques de l'Academie des Sciences de Paris. 350(15-16): 761-766.
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| Day T. & Gandon S. (2012) Evolutionary epidemiology of multilocus drug resistance. Evolution. 66(5): 1582-1587.
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| Débarre F., Lion S., van Baalen M. & Gandon S. (2012) Evolution of host life-history traits in a spatially structured host-parasite system. The American Naturalist. 179(1): 52-63.
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| Fellous S., Duncan A., Quillery E., Vale P. F. & Kaltz O. (2012) Genetic influence on disease spread following arrival of infected carriers. Ecology Letters.
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| Gandon S., Hochberg M. E., Holt R. D. & Day T. (2012) What limits the evolutionary emergence of pathogens? Philosophical Transactions of the Royal Society B.
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| Garnier R., Boulinier T. & Gandon S. (2012) Coevolution between maternal transfer of immunity and other resistance strategies against pathogens. Evolution. 66(10): 3067-3078.
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| Pascua L. L., Gandon S. & Buckling A. (2012) Abiotic heterogeneity drives parasite local adaptation in coevolving bacteria and phages. Journal of evolutionary biology. 25(1): 187-195.
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| Raoul G. (2012) Local stability of evolutionary attractors for continuous structured populations. Monatshefte fur Mathematik. 165(1): 117-144.
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| Raoul G. (2012) Non-local interaction equations: stationary states and stability analysis. Differential and Integral Equations. 25(5-6): 417-440.
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| Vale P. F., Choisy M., Froissart R., Sanjuan R. & Gandon S. (2012) The distribution of mutational fitness effects of phage φx174 on different hosts. Evolution. 66(11): 3495-3507.
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| Vézilier J., Nicot A., Gandon S. & Rivero A. (2012) Plasmodium infection decreases fecundity and increases survival of mosquitoes. Proceedings of the Royal Society B. 279: 4033-4041.
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| Vézilier J., Nicot A., de Lorgeril J., Gandon S. & Rivero A. (2012) The impact of insecticide resistance onculex pipiens immunity. Evolutionary Applications. 6: 497–509.
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| Abbot P., Abe J., Alcock J., Alizon S., Alpedrinha J. A. C., Andersson M., Andre J-B., van Baalen M., Balloux F., Balshine S., Barton N., Beukeboom L. W., Biernaskie J. M., Bilde T., Borgia G., Breed M., Brown S., Bshary R., Buckling A., Burley N. T., Burton-Chellew M. N., Cant M. A., Chapuisat M., Charnov E. L., Clutton-Brock T., Cockburn A., Cole B. J., Colegrave N., Cosmides L., Couzin I. D., Coyne J. A., Creel S., Crespi B., Curry R. L., Dall S. R. X., Day T., Dickinson J. L., Dugatkin L. A., El Mouden C., Emlen S. T., Evans J., Ferriere R., Field J., Foitzik S., Foster K., Foster W. A., Fox C. W., Gadau J., Gandon S., Gardner A., Gardner M. G., Getty T., Goodisman M. A. D., Grafen A., Grosberg R., Grozinger C. M., Gouyon P-H., Gwynne D., Harvey P. H., Hatchwell B. J., Heinze J., Helantera H., Helms K. R., Hill K., Jiricny N., Johnstone R. A., Kacelnik A., Kiers E. T., Kokko H., Komdeur J., Korb J., Kronauer D., Kummerli R., Lehmann L., Linksvayer T. A., Lion S., Lyon B., Marshall J. A. R., McElreath R., Michalakis Y., Michod R. E., Mock D., Monnin T., Montgomerie R., Moore A. J., Mueller U. G., Noe R., Okasha S., Pamilo P., Parker G. A., Pedersen J. S., Pen I., Pfennig D., Queller D. C., Rankin D. J., Reece S. E., Reeve H. K., Reuter M., Roberts G., Robson S. K. A., Roze D., Rousset F., Rueppell O., Sachs J. L., Santorelli L., Schmid-Hempel P., Schwarz M. P., Scott-Phillips T., Shellmann-Sherman J., Sherman P. W., Shuker D. M., Smith J., Spagna J. C., Strassmann B., Suarez A. V., Sundstrom L., Taborsky M., Taylor P., Thompson G., Tooby J., Tsutsui N. D., Tsuji K., Turillazzi S., Ubeda F., Vargo E. L., Voelkl B., Wenseleers T., West S. A., West-Eberhard M. J., Westneat D. F., Wiernasz D. C., Wild G., Wrangham R., Young A. J., Zeh D. W., Zeh J. A. & Zink A. (2011) Inclusive fitness theory and eusociality. Nature. 471(7339): E1-4.
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| Alizon S. & Lion S. (2011) Within-host parasite cooperation and the evolution of virulence. Proceedings of the Royal Society B. 278(1725): 3738-3747.
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| Blanquart F. & Gandon S. (2011) Evolution of migration in a periodically changing environment. The American Naturalist. 177(2): 188-201.
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| Débarre F. & Gandon S. (2011) Evolution in heterogeneous environments: between soft and hard selection. The American Naturalist. 177(3): E84-97.
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| Fellner K. & Raoul G. (2011) Stability of stationary states of non-local equations with singular interaction potentials. Mathematical and Computer Modelling. 53(7-8): 1436-1450.
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| Jabin P-E. & Raoul G. (2011) On selection dynamics for competitive interactions. Journal of Mathematical Biology. 63(3): 493-517.
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| Lion S., Jansen V. A. A. & Day T. (2011) Evolution in structured populations: beyond the kin/group debate. Trends in Ecology and Evolution. 26(4): 193-201.
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| Raoul G. (2011) Long time evolution of populations under selection and vanishing mutations. Acta Applicandae Mathematica. 114:
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| Rousset F. & Lion S. (2011) Much ado about nothing: Nowak et al.'s charge against inclusive fitness theory. Journal of evolutionary Biology. 24(6): 1386-1392.
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| Vale P. F., Wilson A. J., Best A., Boots M. & Little T. (2011) Epidemiological, evolutionary, and coevolutionary implications of context-dependent parasitIsm. The American Naturalist. 177: 510:521.
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| Berngruber T. W., Weissing F. J. & Gandon S. (2010) Inhibition of superinfection and the evolution of viral latency. Journal of Virology. 84(19): 10200-10208.
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| Champagnat N., Jabin P-E. & Raoul G. (2010) Convergence to equilibrium in competitive lotka-volterra equations. Comptes Rendus Mathematiques de l'Academie des Sciences de Paris. 348(23-24): 1267-1272.
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| Débarre F. & Gandon S. (2010) Evolution of specialization in a spatially continuous environnement. Journal of evolutionary Biology. 23: 1090-1099.
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| Fellner K. & Raoul G. (2010) Stable stationary states of non-local interaction equations. Mathematical Models and Methods in Applied Sciences. 20(12): 2267-2291.
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| Lion S. (2010) Evolution of reproductive effort in viscous populations: the importance of population dynamics. Journal of evolutionary Biology. 23(4): 866-74.
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| Lion S. & Boots M. (2010) Are parasites "prudent" in space? Ecology Letters. 13(10): 1245-55.
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| Lion S. & Gandon S. (2010) Life history, habitat saturation and the evolution of fecundity and survival altruism. Evolution. 64(6): 1594-606.
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| Martin G. & Gandon S. (2010) Lethal mutagenesis and evolutionary epidemiology. Philosophical Transactions of the Royal Society of London B: Biological Sciences. 365: 1953-1963.
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| Patot S., Martinez J., Allemand R., Gandon S., Varaldi J. & Fleury F. (2010) Prevalence of a virus inducing behavioural manipulation near species range border. Molecular Ecology. 19: 2995-3007.
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| Rivero A., Vézilier J., Weill M., Read A. F. & Gandon S. (2010) Insecticide control of vector borne diseases: when is insecticide resistance a problem? PLoS Pathogens. 6: e1001000.
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| Vézilier J., Nicot A., Gandon S. & Rivero A. (2010) Insecticide resistance and malaria transmission: infection rate and oocyst burden in culex pipiens mosquitoes infected with plasmodium relictum. Malaria journal. 9: 379.
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| Débarre F., Lenormand T. & Gandon S. (2009) Evolutionary epidemiology of drug-resistance in space. PLoS Computational Biology. 5: e1000337. Journal du
CNRS
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| Gandon S. & Day T. (2009) Evolutionary epidemiology and the dynamics of adaptation. Evolution. 63: 826-838.
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| Gandon S., Varaldi J., Fleury F. & Rivero A. (2009) Evolution and manipulation of parasitoid eggload. Evolution. 63: 2974-2984.
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| Gandon S. & Nuismer S. (2009) Interactions between drift, gene flow, and selection mosaics drive parasite local adaptation. The American Naturalist. 173: 212-224.
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| Lion S. (2009) Relatedness in spatially structured populations with empty sites: an approach based on spatial moment equations. Journal of theoretical Biology. 260(1): 121-131.
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| Lion S. & Gandon S. (2009) Habitat saturation and the spatial evolutionary ecology of altruism. Journal of evolutionary Biology. 22: 1487-1502.
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| Lion S. & van Baalen M. (2009) The evolution of juvenile-adult interactions in populations structured in age and space. Theoretical Population Biology. 76(2): 132-145.
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| Varaldi J., Patot S., Nardin M. & Gandon S. (2009) A virus shaping reproductive strategy in a Drosophila Parasitoid. Advances in Parasitology. 70: 333-363.
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| Débarre F. & Gandon S. (2008) Epidémiologie évolutive des maladies infectieuses. In: Introduction à l'Epidémiologie Intégrative des Maladies Infectieuses et Parasitaires. (Guégan J-F., Choisy M., eds.) De Boeck Université, Collection Masters, Louvain-la-Neuve, Belgique, p. 347-374.
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| Desvillettes L., Jabin P-E., Mischler S. & Raoul G. (2008) On selection dynamics for continuous structured populations. Communication in mathematical sciences. 6(3): 729-747.
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| Gandon S. & Day T. (2008) Evidences of parasite evolution after vaccination. Vaccine. 26: C4-C7.
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| Gandon S., Buckling A., Decaestecker E. & Day T. (2008) Host-parasite coevolution and patterns of adaptation across time and space. Journal of evolutionary Biology. 21: 1861-1866.
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| Lion S. & van Baalen M. (2008) Self-structuring in spatial evolutionary ecology. Ecology Letters. 11(3): 277-295.
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| Mackinnon M. J., Gandon S. & Read A. (2008) Virulence evolution in response to vaccination: the case of malaria. Vaccine. 26: C42-C52.
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| Nuismer S. L., Otto S. P. & Blanquart F. (2008) When do host-parasite interactions drive the evolution of nonrandom mating? Ecology Letters. 11(9): 937-946.
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| Nuismer S. L. & Gandon S. (2008) Moving beyond common garden and transplant designs: insight into the causes of local adaptation in species interactions. The American Naturalist. 171: 658-668.
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| Day T. & Gandon S. (2007) Applying population-genetic models in theoretical evolutionary epidemiology. Ecology Letters. 10: 876-888.
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| Gandon S. & Day T. (2007) The evolutionary epidemiology of vaccination. Journal of the Royal Society Interface. 4: 803-817.
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| Gandon S. & Otto S. (2007) The evolution of sex and recombination in response to abiotic or coevolutionary fluctuations in epistasis. Genetics. 175: 1835-1853.
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| Lion S. & van Baalen M. (2007) From infanticide to parental care: why spatial structure can help adults be good parents. The American Naturalist. 170(2): E26-E46.
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| Poullain V., Gandon S., Brockhurst M., Buckling A. & Hochberg M. (2007) The evolution of specificity in evolving and coevolving antagonistic interactions between bacteria and phage. Evolution. 61: 1-11.
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| André J. B. & Gandon S. (2006) Vaccination, within-host dynamics and virulence evolution. Evolution. 60: 13-23.
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| Day T. & Gandon S. (2006) Insights from Price’s equation into evolutionary epidemiology. In: Disease evolution: models, concepts and data analyses. (Feng Z. D. . U., Levin S., eds.) American Mathematical Society, p. 23-43.
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| Gandon S., Rivero A. & Varaldi J. (2006) Superparasitism evolution: adaptation or manipulation? The American Naturalist. 167: E1-E27.
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| Lion S., van Baalen M. & Wilson W. G. (2006) The evolution of parasite manipulation of host dispersal. Proceedings of the Royal Society of London B: Biological Sciences. 273: 1063-1071.
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| Varaldi J., Gandon S., Rivero A., Patot S. & Fleury F. (2006) A newly discovered virus manipulates superparasitism behaviour in a parasitoid wasp. In: Insect Symbiosis II. (Bourtzis K., Miller T. A., eds.) CRC Press, Boca Raton, p. 119-139.
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| Ferguson H., Gandon S., Mackinnon M. J. & Read A. F. (2005) Malaria parasite virulence in mosquitoes. In: Genetically Modified Mosquitoes for Malaria Control. (Boete C., ed.) Landes Bioscience
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| Gandon S. (2005) Parasitic manipulation: a theoretical framework may help. Behavioural Processes. 68: 247-248.
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| Morgan A. D., Gandon S. & Buckling A. (2005) The effect of migration on local adaptation in a coevolving host-parasite system. Nature. 437: 253-256.
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| Gandon S. (2004) Evolution of multihost parasites. Evolution. 58: 455-469.
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| Lion S., Gabriel F., Bost B., Fievet J., Dillmann C. & de Vienne D. (2004) An extension to the metabolic control theory taking into account correlations between enzyme concentrations. European Journal of Biochemistry. 271: 1-17.
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| Read A. F., Gandon S., Nee S. & Mackinnon M. J. (2004) The evolution of pathogen virulence in response to animal and public health interventions. In: Evolutionary Aspects of Infectious Diseases. (Dronamraj K., ed.) Cambridge University Press, Cambridge, UK, p. 265-292.
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| Gandon S. & Day T. (2003) A reply to Ebert & Bull (2003): Understanding and managing pathogen evolution: a way forward. Trends in Microbiology. 11: 206-207.
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| Gandon S., Mackinnon M. J., Nee S. & Read A. F. (2003) Imperfect vaccination: some epidemiological and evolutionary consequences. Proceedings of the Royal Society of London B: Biological Sciences. 270: 1129-1136.
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| Gandon S. (2002) Local adaptation and the geometry of host-parasite coevolution. Ecology Letters. 5: 246-256.
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| Gandon S., Mackinnon M. J., Nee S. & Read A. F. (2002) Antitoxin vaccines and pathogen virulence - reply. Nature. 417: 610.
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| Gandon S., Agnew P. & and Michalakis Y. (2002) Coevolution between parasite virulence and host life-history traits. The American Naturalist. 160: 374-388.
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| Gandon S., van Baalen M. & Jansen V. A. A. (2002) The evolution of parasite virulence, superinfection, and host resistance. The American Naturalist. 159: 658-669.
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| Gandon S. & Michalakis Y. (2002) Local adaptation, evolutionary potential and host-parasite coevolution: interactions between migration, mutation, population size and generation time. Journal of evolutionary Biology. 15: 451-462.
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| Gandon S. & Michalakis Y. (2002) Multiple infection and its consequences for virulence management. In: Virulence management: the adaptive dynamics of pathogen-host interactions. (Dieckmann U., Metz J. A. J., Sabelis M. W., Sigmund K., eds.) Cambridge University Press, Cambridge, UK
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| Rousset F. & Gandon S. (2002) Evolution of the distribution of dispersal distance under distance-dependent cost of dispersal. Journal of evolutionary Biology. 15: 515-523.
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| Gandon S., Mackinnon M. J., Nee S. & Read A. F. (2001) Imperfect vaccines and the evolution of pathogen virulence. Nature. 414: 751-756.
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| Gandon S., Jansen V. A. A. & van Baalen M. (2001) Host life history and the evolution of parasite virulence. Evolution. 55: 1056-1062.
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| Gandon S. & Michalakis Y. (2001) Multiple causes of the evolution of dispersal. In: Causes, consequences and mechanisms of dispersal at the individual, population and community level. (Clobert J., Nichols J. D., Danchin E., Dhondt A., eds.) Oxford University Press, Oxford, UK, p. 155-167.
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| Gandon S. & Michalakis Y. (2000) Evolution of parasite virulence against qualitative or quantitative form of resistance. Proceedings of the Royal Society of London B: Biological Sciences. 267: 985-990.
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| Ronce O., Gandon S. & Rousset F. (2000) Kin selection and natal dispersal in age-structured populations. Theoretical Population Biology. 58: 143-159.
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| Gandon S. (1999) Kin competition, the cost of inbreeding and the evolution of dispersal. Journal of Theoretical Biology. 200: 345-364.
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| Gandon S. & Michalakis Y. (1999) The evolution of dispersal in a metapopulation with extinction and kin competition. Journal of Theoretical Biology. 199: 275-290.
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| Gandon S. & Rousset F. (1999) The evolution of stepping stone dispersal rates. Proceedings of the Royal Society of London B: Biological Sciences. 266: 2507-2513.
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| Kaltz O., Gandon S., Michalakis Y. & Shykoff J. (1999) Local maladaptation in the anther-smut fungus Microbotryum violaceum to its host plant Silene latifolia: evidence from a cross-inoculation experiment. Evolution. 53: 395-407.
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| Gandon S. (1998) The curse of the pharaoh hypothesis. Proceedings of the Royal Society of London B: Biological Sciences. 265: 1545-1552.
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| Gandon S., Ebert D., Olivieri I. & Michalakis Y. (1998) Differential adaptation in spatially heterogeneous environments and host-parasite coevolution. In: Genetic Structure and Local adaptation in natural insect populations. (Mopper S., Strauss S., eds.) Chapman and Hall, New York, NJ, USA, p. 325-340.
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| Gandon S. & Van Zandt P. A. (1998) Local adaptation and host-parasite interactions. Trends in Ecology and Evolution. 13: 214-216.
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| Godelle B., Austerlitz F., Brachet S., Colas B., Cuguen J., Gandon S., Gouyon P-H., Lefranc M., Olivieri I., Reboud X. & Vitalis R. (1998) Système génétique, polymorphisme neutre et sélectionné : implications en biologie de la conservation. Genetics Selection Evolution. 30: S15-S28.
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| Gandon S., Capowiez Y., Dubois Y., Michalakis Y. & Olivieri I. (1996) Local adaptation and gene-for-gene coevolution in a metapopulation model. Proceedings of the Royal Society of London B: Biological Sciences. 263: 1003-1009.
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| Gandon S., Ebert D. & Michalakis Y. (1996) Metapopulations and local adaptation in host-parasite interactions. Trends in Ecology and Evolution. 11: 431.
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